STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF06214.1KEGG: mdi:METDI2374 1.3e-48 putative ABC transporter protein, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (312 aa)    
Predicted Functional Partners:
EKF06215.1
Amino acid or sugar ABC transport system, permease protein; KEGG: mdi:METDI2373 1.1e-47 putative L-arabinose transporter, membrane component of sugar ABC transporter (AraH-like); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
EKF01207.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R4723 2.8e-211 ABC transporter related; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.992
EKF01218.1
Basic membrane protein; KEGG: ach:Achl_3140 0.0061 transcriptional regulator, LacI family K02529.
 
 
 0.962
EKF01544.1
Basic membrane protein; KEGG: cja:CJA_0006 0.54 amy13G; alpha-amylase, putative, amy13G; Psort location: Periplasmic, score: 9.83.
 
 
 0.961
rbsA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.896
EKF01135.1
Hypothetical protein; KEGG: dgr:Dgri_GH16034 0.0015 GH16034 gene product from transcript GH16034-RA; K11423 histone-lysine N-methyltransferase SETD2; Psort location: Cytoplasmic, score: 8.96.
    
  0.676
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.