STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmBtRNA synthase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (217 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
 
 
 0.899
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
   
 
 0.867
EKF00369.1
rRNA SAM-dependent protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.854
EKF00502.1
Putative NOL1/NOP2/sun family protein; KEGG: bbe:BBR47_43550 7.3e-30 probable ribosomal RNA small subunit methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.772
EKE99592.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
    0.738
EKF05390.1
tRNA synthase; KEGG: npu:Npun_R0877 7.3e-204 RNA methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.721
EKF03534.1
Hypothetical protein; KEGG: sdn:Sden_2573 0.52 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.707
EKE97847.1
Hypothetical protein; KEGG: cbe:Cbei_2320 0.89 PTS system, trehalose-specific IIBC subunit; K02818 PTS system, trehalose-specific IIB component K02819.
  
  
 0.707
EKF01199.1
Hypothetical protein; KEGG: bau:BUAPTUC7_183 0.74 yfjB; NAD kinase monomer (YfjB) K00858; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.707
EKF01107.1
Hypothetical protein; KEGG: cqu:CpipJ_CPIJ010114 0.25 proteasome subunit alpha type; K02729 20S proteasome subunit alpha 5; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.707
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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