STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF06230.1Aspartate transaminase; KEGG: npu:Npun_R0187 1.4e-191 aminotransferase, class I and II K00812; Psort location: Cytoplasmic, score: 9.97. (388 aa)    
Predicted Functional Partners:
pheA
KEGG: npu:Npun_R3887 8.6e-114 prephenate dehydratase K04518.
   
 0.871
EKE97400.1
KEGG: ava:Ava_3046 0. ferredoxin (flavodoxin) oxidoreductase K03737.
    
 0.861
EKF00361.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.861
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
    
 0.856
EKF00973.1
Putative delta-1-pyrroline-5-carboxylate dehydrogenase; KEGG: ana:alr0540 0. 1-pyrroline-5 carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase K00318; Psort location: Cytoplasmic, score: 9.97; Belongs to the aldehyde dehydrogenase family.
   
 0.795
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
   
 0.785
EKF05682.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.768
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.763
EKE96610.1
ACT domain protein; KEGG: npu:Npun_F1023 3.5e-220 malic enzyme, NAD-binding K00027; Psort location: Cytoplasmic, score: 8.96.
  
 0.756
EKF03415.1
Pyruvate kinase; KEGG: npu:Npun_F4277 6.8e-288 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
   
 0.735
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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