STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06245.1Periplasmic solute binding family protein; KEGG: sah:SaurJH1_2478 5.4e-16 ribulose-phosphate 3-epimerase K01783; Belongs to the bacterial solute-binding protein 9 family. (379 aa)    
Predicted Functional Partners:
EKF06247.1
Putative metal ion ABC transporter, permease protein; KEGG: rcm:A1E_01645 1.8e-17 3-demethylubiquinone-9 3-methyltransferase K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.995
EKF06246.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_1600 5.5e-112 ABC transporter-like K09820; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.983
EKF05512.1
ABC 3 transport family protein; KEGG: rcm:A1E_01645 9.9e-26 3-demethylubiquinone-9 3-methyltransferase K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.981
EKF05511.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_4438 4.9e-111 ABC transporter-like K02074; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.951
EKF05392.1
Hypothetical protein; KEGG: ava:Ava_3542 0.00027 PAS/PAC sensor signal transduction histidine kinase K00936.
  
 
 0.902
EKF06208.1
KEGG: npu:Npun_F6325 6.2e-223 polar amino acid ABC transporter, inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.872
EKF00051.1
ABC transporter, permease protein; KEGG: npu:Npun_R0695 1.5e-70 extracellular solute-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.872
potA
Putative putrescine/spermidine ABC transporter ATPase protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
     
 0.760
EKF00892.1
ABC transporter, quaternary amine uptake transporter family, substrate-binding protein; KEGG: lwe:lwe1443 5.0e-47 opuCC; glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein K05845; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.731
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.709
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.