STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05896.1Peptidase, M23 family; KEGG: npu:Npun_F0058 1.3e-176 peptidase M23B; Psort location: Extracellular, score: 9.64. (547 aa)    
Predicted Functional Partners:
EKF05894.1
KEGG: npu:Npun_F0057 4.4e-103 biotin--acetyl-CoA-carboxylase ligase K03524; Psort location: Cytoplasmic, score: 9.26.
       0.799
EKF00372.1
KEGG: npu:Npun_R4647 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.705
EKF05895.1
Hypothetical protein; KEGG: hip:CGSHiEE_02405 2.2e-14 trmU; hypothetical protein K05810; Psort location: Cytoplasmic, score: 8.96; Belongs to the multicopper oxidase YfiH/RL5 family.
 
    0.686
EKE97480.1
KEGG: npu:Npun_F3870 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.681
EKF05834.1
KEGG: npu:Npun_F3055 6.9e-295 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.674
EKE99867.1
Transglycosylase; KEGG: npu:Npun_R0887 0. FHA modulated glycosyl transferase/transpeptidase; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.661
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
   0.438
EKE99098.1
KEGG: ana:alr5101 0. pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.415
EKF02073.1
SpoIID/LytB domain protein; KEGG: cts:Ctha_1380 0.98 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b.
 
   
 0.406
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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