STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpcTPutative CpeT protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (196 aa)    
Predicted Functional Partners:
EKF02380.1
KEGG: amr:AM1_C0118 1.6e-82 cpcE; phycocyanobilin lyase subunit alpha; K02288 phycocyanobilin lyase alpha subunit; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.892
EKF02361.1
Allophycocyanin beta subunit; KEGG: mdi:METDI3402 0.95 putative L-aspartate oxidase (NadB-like) K00278.
  
   
 0.880
EKF02381.1
KEGG: syg:sync_0485 2.0e-27 cpcF; phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit K02289.
 
   
 0.861
cpcS
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.858
cpcS-5
CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.857
EKE97639.1
Allophycocyanin beta subunit; KEGG: pth:PTH_0270 0.76 paaJ; acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase.
  
   
 0.856
EKF03349.1
Phycobilisome rod-core linker; KEGG: ctc:CTC00194 0.084 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Belongs to the phycobilisome linker protein family.
 
   
 0.854
EKF05389.1
Allophycocyanin; KEGG: amt:Amet_3605 0.98 alanine--glyoxylate transaminase K00839.
  
   
 0.848
EKF03345.1
Phycocyanin beta subunit; KEGG: mpu:MYPU_2670 0.15 atpG; F0F1 ATP synthase subunit gamma K02115.
  
   
 0.847
EKF03248.1
Allophycocyanin alpha subunit; KEGG: hor:Hore_17860 0.49 ATP synthase F0, C subunit K02110.
  
   
 0.847
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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