STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF05946.1Bacterial capsule synthesis protein PGA_cap; KEGG: mkm:Mkms_4753 1.7e-05 Mur ligase middle domain-containing protein; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Psort location: CytoplasmicMembrane, score: 7.88. (385 aa)    
Predicted Functional Partners:
EKE96596.1
Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
    0.803
EKF05945.1
Hypothetical protein; KEGG: fno:Fnod_1701 0.97 radical SAM domain-containing protein; K04070 putative pyruvate formate lyase activating enzyme.
       0.773
EKF03474.1
Hypothetical protein; KEGG: ade:Adeh_1329 7.3e-10 histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.477
EKF05944.1
Hypothetical protein.
       0.434
EKE98279.1
KEGG: chu:CHU_2979 7.0e-24 TPR repeat-containing protein K06026.
  
     0.427
EKF03639.1
Hypothetical protein; KEGG: bmt:BSUIS_A1875 0.96 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A.
  
     0.401
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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