STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05996.1Hypothetical protein; KEGG: ckl:CKL_2780 0.23 nifD7; NifD7; Psort location: Cytoplasmic, score: 8.96. (361 aa)    
Predicted Functional Partners:
EKF03609.1
RbcX protein; KEGG: mmu:381204 0.35 Naaladl1; N-acetylated alpha-linked acidic dipeptidase-like 1 K01301.
 
 
   0.972
cbbL
Ribulose bisphosphate carboxylase large chain protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.942
EKF03171.1
Putative ribulose-bisphosphate; KEGG: ava:Ava_3903 6.6e-187 ribulose 1,5-bisphosphate carboxylase small subunit K01602; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.884
EKF00351.1
KEGG: npu:Npun_F4294 9.4e-243 ribulose bisphosphate carboxylase, small chain.
  
 
   0.860
EKF03610.1
KEGG: npu:Npun_F4197 9.7e-51 ribulose bisphosphate carboxylase, small chain RbcS K01602.
 
 
   0.817
EKF03773.1
Hypothetical protein; KEGG: kra:Krad_1266 0.0023 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b.
  
     0.775
EKF04799.1
Glutaredoxin-like domain DUF836; KEGG: pmg:P9301_04311 8.0e-08 thioredoxin family protein.
  
     0.774
EKF01192.1
KEGG: cme:CMK133C 0.77 hypothetical protein, conserved; K10742 DNA replication ATP-dependent helicase Dna2; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
EKF05997.1
Hypothetical protein; KEGG: bid:Bind_2376 0.35 RNA-binding S4 domain-containing protein; K06178 ribosomal large subunit pseudouridine synthase B.
       0.773
EKF05046.1
Hypothetical protein; KEGG: fma:FMG_1196 0.45 holo-[acyl-carrier protein] synthase; K00997 holo-[acyl-carrier protein] synthase.
  
     0.773
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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