STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06023.1Putative HNH nuclease; KEGG: rpe:RPE_3937 0.19 coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase; Psort location: Cytoplasmic, score: 8.96. (211 aa)    
Predicted Functional Partners:
EKF06024.1
RecF/RecN/SMC protein; KEGG: edi:EDI_282700 0.019 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96.
 
     0.954
EKF00036.1
Putative toxin-antitoxin system, antitoxin component; KEGG: spo:SPAC1556.01c 0.15 SPAP4C9.01c; DNA repair protein Rad50; K10866 DNA repair protein RAD50.
  
     0.691
EKF06025.1
Ser/Thr protein phosphatase family protein; KEGG: npu:Npun_F1003 4.3e-135 metallophosphoesterase; Psort location: Periplasmic, score: 9.83.
       0.572
EKF06022.1
Putative antibiotic biosynthesis protein; KEGG: dal:Dalk_3023 0.42 oxaloacetate decarboxylase; K01959 pyruvate carboxylase subunit A K01960.
       0.553
EKF01464.1
Putative McrA/HNH; KEGG: scl:sce1711 4.1e-05 mcrA; HNH endonuclease family protein.
  
     0.553
EKE96493.1
Hypothetical protein; KEGG: kra:Krad_1068 0.75 endo-1,4-beta-xylanase.
  
     0.537
EKF04069.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.518
EKF05377.1
Hypothetical protein; KEGG: bld:BLi03706 0.999 sacB; SacB; K00692 levansucrase.
  
     0.510
EKE96657.1
Putative endonuclease; KEGG: scl:sce1711 9.0e-05 mcrA; HNH endonuclease family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.504
EKF04409.1
Hypothetical protein; KEGG: art:Arth_3213 0.58 enoyl-CoA hydratase K01692.
  
     0.496
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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