STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF06041.1Hypothetical protein; KEGG: dya:Dyak_GE16376 9.6e-07 GE16376 gene product from transcript GE16376-RA; K10532 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (493 aa)    
Predicted Functional Partners:
EKF06042.1
KEGG: btl:BALH_0322 1.2e-06 polysaccharide deacetylase-like protein; K01452 chitin deacetylase.
 
     0.818
EKF04189.1
ICE-like protease p20 domain protein; KEGG: afm:AFUA_3G14140 6.2e-16 metacaspase CasB.
  
     0.751
EKF00010.1
Putative C14 family peptidase; KEGG: afm:AFUA_1G06700 1.0e-08 metacaspase CasA; Psort location: Cytoplasmic, score: 8.96.
  
     0.699
EKE99968.1
EF hand; KEGG: hsa:801 5.6e-32 CALM1; calmodulin 1 (phosphorylase kinase, delta) K02183; Psort location: Cytoplasmic, score: 8.96.
  
     0.680
EKF00761.1
Putative TPR repeat-containing domain protein.
  
     0.648
EKF00758.1
Hypothetical protein; KEGG: bth:BT_4262 0.77 peptidyl-dipeptidase; K01284 peptidyl-dipeptidase Dcp.
  
     0.641
EKE96802.1
Glycosyl hydrolase, family 18; KEGG: edi:EDI_120190 1.4e-11 chitotriosidase-1 precursor; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.568
EKF05791.1
Putative CRISPR-associated RAMP; KEGG: reu:Reut_A1271 0.51 3-hydroxybutyrate dehydrogenase K00019.
  
     0.527
EKF00764.1
Putative peptidase C11, clostripain; KEGG: cbi:CLJ_B2122 4.0e-07 cloSI; clostripain; Psort location: Cytoplasmic, score: 8.96.
  
     0.508
EKE98068.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.487
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.