STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05593.1RND transporter, hydrophobe/amphiphile efflux-1 family protein; KEGG: dat:HRM2_00450 2.5e-53 rndA; RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1058 aa)    
Predicted Functional Partners:
EKF02537.1
Efflux transporter, RND family, MFP subunit; KEGG: aag:AaeL_AAEL001440 0.00071 E1a binding protein P400; K11320 E1A-binding protein p400; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.989
EKF05592.1
Efflux transporter, RND family, MFP subunit; KEGG: aap:NT05HA_2073 0.0030 delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.987
EKF05862.1
Efflux transporter, RND family, MFP subunit; KEGG: npu:Npun_F2138 8.9e-14 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.979
EKF05138.1
Efflux transporter, RND family, MFP subunit; KEGG: mbr:MONBRDRAFT_37886 2.1e-05 hypothetical protein; K10643 CCR4-NOT transcription complex subunit 4; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.978
EKE97354.1
Efflux transporter, RND family, MFP subunit; KEGG: npu:Npun_F2138 1.4e-10 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.953
EKF03933.1
Efflux transporter, RND family, MFP subunit; KEGG: dme:Dmel_CG34422 0.0049 CG34422 gene product from transcript CG34422-RA; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.941
EKF01738.1
Type I secretion membrane fusion protein, HlyD family; KEGG: npu:Npun_F2138 3.5e-07 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.914
EKF05763.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 0.00045 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 10.00.
 
 0.908
EKF04677.1
Putative outer membrane efflux protein; KEGG: sce:YIR019C 7.8e-07 MUC1; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p) K01178; Psort location: OuterMembrane, score: 9.95.
 
 0.902
EKF05759.1
Putative RND family protein; KEGG: npu:Npun_F2138 1.0e-09 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.870
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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