Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
EKF05599.1Hypothetical protein; KEGG: pal:PAa_0546 0.11 tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase. (95 aa)    
Predicted Functional Partners:
EKF05600.1
Flavin reductase like domain protein; KEGG: syx:SynWH7803_2405 1.1e-166 dfa; diflavin flavoprotein A; Psort location: Cytoplasmic, score: 9.97.
       0.773
EKF05598.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
EKF05601.1
Hypothetical protein; KEGG: rsk:RSKD131_0409 0.56 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
       0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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