STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKF05609.1KEGG: cpc:Cpar_0021 3.7e-26 geranylgeranyl reductase; K10960 geranylgeranyl reductase. (373 aa)    
Predicted Functional Partners:
EKF03432.1
Chlorophyll synthase; KEGG: ana:all4480 9.0e-167 chlG; bacteriochlorophyll/chlorophyll a synthase; K04040 chlorophyll synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.645
EKF05610.1
Hypothetical protein; KEGG: ava:Ava_3542 0.0025 PAS/PAC sensor signal transduction histidine kinase K00936.
       0.636
EKF03399.1
KEGG: ava:Ava_3311 0. magnesium chelatase subunit H K03403; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.624
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.603
chlB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
  
 0.565
EKF05611.1
Hypothetical protein; KEGG: pic:PICST_78208 0.83 ACH1; Acetyl-CoA hydrolase (Acetyl-CoA deacylase) (Acetyl-CoA acylase); K01067 acetyl-CoA hydrolase; Psort location: Extracellular, score: 9.64.
       0.553
EKF02009.1
KEGG: npu:Npun_F2675 0. magnesium chelatase, H subunit; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.553
chlN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
 
  
 0.534
EKF03950.1
KEGG: ana:alr3201 8.0e-111 Mg-protoporphyrin IX methyl transferase K03428; Psort location: Cytoplasmic, score: 8.96.
  
    0.495
EKF03929.1
Metallo-beta-lactamase domain protein; KEGG: sax:USA300HOU_2609 0.00011 metallo-beta-lactamase; Psort location: Cytoplasmic, score: 8.96.
 
     0.480
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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