STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05612.1Toxin-antitoxin system, antitoxin component, HicB family; KEGG: abm:ABSDF3090 0.010 truA; tRNA pseudouridine synthase A K06173. (73 aa)    
Predicted Functional Partners:
EKE99380.1
Hypothetical protein; KEGG: lbu:LBUL_0451 0.29 glutamate racemase; K01776 glutamate racemase.
 
 
 0.845
EKE97101.1
Toxin-antitoxin system, toxin component, HicA family; KEGG: maq:Maqu_3558 0.20 acetylornithine deacetylase K01438.
 
 
 0.841
EKF04866.1
Toxin-antitoxin system, toxin component, HicA family; KEGG: bpt:Bpet0886 0.31 fatty acid CoA ligase.
   
 0.807
EKF05613.1
Hypothetical protein; KEGG: dya:Dyak_GE12699 0.24 GE12699 gene product from transcript GE12699-RA; K01254 leukotriene-A4 hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.757
EKF01113.1
Toxin-antitoxin system, toxin component, RelE family; KEGG: dme:Dmel_CG4420 0.62 CG4420 gene product from transcript CG4420-RA K11885.
 
  
 0.690
EKE96732.1
Putative transcription regulator; KEGG: hwa:HQ1364A 0.36 uvrD; DNA helicase II K03657; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.604
EKF01482.1
Plasmid stabilization system protein; KEGG: hip:CGSHiEE_07380 0.053 glyS; glycyl-tRNA synthetase subunit beta.
  
  
  0.588
EKF03650.1
Addiction module toxin, Txe/YoeB family; KEGG: hch:HCH_06393 0.98 dGTP triphosphohydrolase; K01129 dGTPase; Psort location: Cytoplasmic, score: 8.96.
     
  0.580
EKF05891.1
Toxin-antitoxin system, toxin component, RelE family; KEGG: art:Arth_3018 0.37 thyA; thymidylate synthase K00560.
  
  
  0.567
EKF03651.1
Toxin-antitoxin system, antitoxin component, PHD family; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
  
  0.525
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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