Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKF05621.1Exonuclease; KEGG: pen:PSEEN1811 1.3e-30 exonuclease K01146; Psort location: Cytoplasmic, score: 8.96. (187 aa)    
Predicted Functional Partners:
EKE99983.1
KEGG: ana:all5306 5.7e-117 exodeoxyribonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
    
  0.706
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
    
 
 0.663
rnc-2
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
    
 
 0.663
EKF05622.1
Hypothetical protein; KEGG: gdj:Gdia_2605 0.30 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.585
EKF01097.1
TROVE domain protein; KEGG: smr:Smar_1047 0.60 DKCLD domain-containing protein; K03177 tRNA pseudouridine synthase B; Psort location: Cytoplasmic, score: 8.96.
  
     0.521
EKF04815.1
Hypothetical protein; KEGG: ypi:YpsIP31758_1078 0.90 ureB; urease subunit beta K01429.
  
     0.496
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
  
  
  0.496
EKF05620.1
Cytochrome P450; KEGG: npu:Npun_R3831 2.4e-173 cytochrome P450; Psort location: Cytoplasmic, score: 9.97.
       0.479
EKF04816.1
Putative domain HDIG; KEGG: sun:SUN_0962 6.8e-07 cca; polynucleotide adenylyltransferase/metal-dependent phosphohydrolase K00974.
 
     0.465
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
    
 
 0.462
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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