STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05631.1KEGG: ava:Ava_1497 2.5e-210 geranylgeranyl reductase; K10960 geranylgeranyl reductase; Psort location: Cytoplasmic, score: 8.96. (418 aa)    
Predicted Functional Partners:
EKF03432.1
Chlorophyll synthase; KEGG: ana:all4480 9.0e-167 chlG; bacteriochlorophyll/chlorophyll a synthase; K04040 chlorophyll synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.989
EKF04929.1
Dimethylallyltranstransferase; KEGG: ava:Ava_3472 4.9e-127 ubiA; tocopherol phytyltransferase K09833.
 
 
 0.951
EKE97602.1
Putative geranyltranstransferase; KEGG: ava:Ava_2704 1.2e-141 farnesyl-diphosphate synthase K00795; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
 0.925
EKF00540.1
Phytoene/squalene synthetase; KEGG: npu:Npun_R2771 8.5e-139 squalene/phytoene synthase; K02291 phytoene synthase.
 
 
 0.923
EKF03399.1
KEGG: ava:Ava_3311 0. magnesium chelatase subunit H K03403; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.922
EKF05011.1
KEGG: ana:alr0096 1.9e-148 sds; solanesyl diphosphate synthase; K02523 octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.915
EKE99302.1
Magnesium chelatase ATPase subunit I; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.890
EKF03950.1
KEGG: ana:alr3201 8.0e-111 Mg-protoporphyrin IX methyl transferase K03428; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.884
acsF
Magnesium-protoporphyrin IX; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
  
  
 0.876
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.870
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.