STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (762 aa)    
Predicted Functional Partners:
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.998
glgA-2
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.997
EKE97012.1
KEGG: ter:Tery_5016 0. glycogen debranching enzyme GlgX; K02438 glycogen operon protein GlgX; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 13 family.
 
0.997
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 0.988
EKE99198.1
Alpha-glucan phosphorylase; KEGG: ana:all2806 0. hypothetical protein; K00688 starch phosphorylase; Psort location: Cytoplasmic, score: 8.96.
 
 0.985
EKF00129.1
KEGG: ava:Ava_2996 0. alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 8.96.
 
 0.985
EKF05177.1
4-alpha-glucanotransferase; KEGG: npu:Npun_F5814 3.9e-237 4-alpha-glucanotransferase K00705.
 
 0.976
EKF03173.1
KEGG: npu:Npun_R6073 2.7e-245 alpha amylase, catalytic region; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.955
EKE98420.1
Alpha amylase, catalytic domain protein; KEGG: ana:alr0169 3.3e-240 cyclomaltodextrin glucanotransferase; K00701 cyclomaltodextrin glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.942
EKF02961.1
KEGG: npu:Npun_F0013 0. alpha amylase, catalytic region; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.941
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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