STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05678.1KEGG: npu:Npun_F0168 8.3e-251 penicillin-binding protein, transpeptidase K03587; Psort location: CytoplasmicMembrane, score: 9.82. (614 aa)    
Predicted Functional Partners:
EKF02019.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: hip:CGSHiEE_06365 9.9e-42 murG; N-acetylglucosaminyl transferase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 0.983
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 0.974
EKE97480.1
KEGG: npu:Npun_F3870 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.964
EKF00372.1
KEGG: npu:Npun_R4647 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
0.964
EKE99173.1
POTRA domain, FtsQ-type; KEGG: tte:TTE1196 0.92 dtd; D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase.
  
 0.931
EKE99098.1
KEGG: ana:alr5101 0. pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
0.927
EKF02174.1
Cell division protein; KEGG: npu:Npun_F4452 7.0e-286 penicillin-binding protein, transpeptidase K05515; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 
0.926
EKF02175.1
KEGG: npu:Npun_F4453 2.0e-281 penicillin-binding protein, transpeptidase K05515; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 
0.926
EKF00107.1
KEGG: npu:Npun_R1733 3.9e-189 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259; Psort location: Periplasmic, score: 9.76.
     
 0.908
EKF00693.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: npu:Npun_R4455 2.8e-101 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260.
     
 0.904
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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