STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05693.1Hypothetical protein; KEGG: nar:Saro_1168 0.98 carotene hydroxylase; K02294 beta-carotene hydroxylase; Psort location: CytoplasmicMembrane, score: 9.82. (40 aa)    
Predicted Functional Partners:
EKF05694.1
SNARE associated protein; KEGG: vcj:VCD_002656 2.0e-20 dihydrolipoamide dehydrogenase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.678
EKF05695.1
Glycosyl transferase; KEGG: ana:all5118 5.3e-146 hypothetical protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.678
EKF05692.1
Pyridine nucleotide-disulfide oxidoreductase family protein; KEGG: npu:Npun_R4765 1.5e-148 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
       0.460
EKF05691.1
Hypothetical protein; KEGG: cyc:PCC7424_2079 0.97 putative anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor.
       0.417
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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