STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05730.1Transposase; KEGG: nmr:Nmar_1781 0.56 2'-5' RNA ligase; K01975 2'-5' RNA ligase. (133 aa)    
Predicted Functional Partners:
EKF05731.1
Transposase; KEGG: cyp:PCC8801_4435 1.3e-110 transposase, IS605 OrfB family.
 
     0.757
EKF05320.1
Transposase; KEGG: sis:LS215_1079 1.1e-17 transposase, IS605 OrfB family.
  
     0.675
EKF05729.1
Hypothetical protein; KEGG: tma:TM1374 0.40 phosphoglycerate mutase; K01834 phosphoglycerate mutase.
       0.655
EKF03986.1
Transposase; KEGG: cyc:PCC7424_3621 5.2e-75 DNA (cytosine-5-)-methyltransferase.
  
     0.560
EKF02760.1
Putative transposase; KEGG: mse:Msed_1513 5.2e-15 IS605 family transposase OrfB K07496.
  
     0.555
EKF05728.1
Hypothetical protein.
       0.488
EKF03814.1
Putative transposase; KEGG: cyc:PCC7424_4609 3.8e-104 transposase, IS605 OrfB family; Psort location: Cytoplasmic, score: 8.96.
  
     0.482
EKE97685.1
Transposase; KEGG: cyp:PCC8801_4435 3.1e-109 transposase, IS605 OrfB family.
  
     0.478
EKF01988.1
Transposase; KEGG: cyp:PCC8801_1857 5.7e-172 transposase, IS605 OrfB family; Psort location: Cytoplasmic, score: 8.96.
  
     0.471
EKF04025.1
Transposase; KEGG: cag:Cagg_2549 1.0e-46 transposase, IS605 OrfB family; Psort location: Cytoplasmic, score: 8.96.
  
     0.454
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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