STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF05742.1Putative bacteriophytochrome; KEGG: ava:Ava_4345 1.3e-23 multi-sensor signal transduction histidine kinase K00936. (179 aa)    
Predicted Functional Partners:
EKE99823.1
Mo-dependent nitrogenase; KEGG: seh:SeHA_C2090 0.96 DNA polymerase III subunit theta K02345.
  
     0.634
EKF02567.1
Bacteriophytochrome; KEGG: ava:Ava_1003 7.9e-191 multi-sensor signal transduction histidine kinase K00936.
  
     0.633
EKF05243.1
KEGG: ava:Ava_3170 4.5e-149 response regulator receiver modulated diguanylate cyclase K02488.
 
      0.617
EKF05744.1
Hypothetical protein; KEGG: sso:SSO0329 0.99 nuoN; NADH dehydrogenase subunit N K00343.
       0.615
EKF03309.1
KEGG: ava:Ava_3170 2.7e-133 response regulator receiver modulated diguanylate cyclase K02488; Psort location: Cytoplasmic, score: 9.97.
 
      0.579
EKF05785.1
Putative CRISPR-associated protein; KEGG: mea:Mex_1p1833 0.24 PAS/PAC sensor signal transduction histidine kinase (fragment).
  
     0.524
EKF02985.1
Mo-dependent nitrogenase; KEGG: ptm:GSPATT00012181001 0.99993 hypothetical protein; K10258 enoyl reductase.
  
     0.520
EKF06134.1
Hypothetical protein; KEGG: ddi:DDB_0191396 0.99 dgtA; glycosyl transferase; K00729 dolichyl-phosphate beta-glucosyltransferase.
  
     0.488
EKF01192.1
KEGG: cme:CMK133C 0.77 hypothetical protein, conserved; K10742 DNA replication ATP-dependent helicase Dna2; Psort location: Cytoplasmic, score: 8.96.
  
     0.488
EKF05053.1
U48 family peptidase; KEGG: gfo:GFO_0014 6.8e-05 metal-dependent membrane protease K01376.
  
     0.479
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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