STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05748.1Putative polyketide; KEGG: sen:SACE_3994 0.82 fadA; 3-ketoacyl-CoA thiolase K00632. (155 aa)    
Predicted Functional Partners:
EKF05056.1
KEGG: ani:AN1752.2 0.34 hypothetical protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component.
  
     0.479
EKF05747.1
Hypothetical protein; KEGG: ara:Arad_12139 0.56 sugar uptake ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein.
       0.464
EKF03719.1
Hypothetical protein; KEGG: npu:Npun_F6194 6.7e-43 DALR anticodon binding domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.451
EKF05746.1
Fe-S oxidoreductase; KEGG: sen:SACE_1403 4.4e-62 putative Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
       0.435
EKF03917.1
Hypothetical protein; KEGG: dma:DMR_39520 0.998 cobU; adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.418
EKF03109.1
TIGR01777 protein; KEGG: npu:Npun_R0504 5.1e-132 hypothetical protein K07071.
     0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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