STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05750.1Carbohydrate-selective porin OprB; KEGG: edi:EDI_244330 0.015 nucleoporin p58/p45; Psort location: OuterMembrane, score: 9.52; Belongs to the OprB family. (555 aa)    
Predicted Functional Partners:
EKF01233.1
Putative surface antigen; KEGG: cre:CHLREDRAFT_195498 2.6e-82 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 10.00.
  
   
 0.824
EKE99321.1
Putative RNase H family protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.763
EKE99742.1
YjgP/YjgQ family protein; KEGG: hiq:CGSHiGG_02270 2.0e-06 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091.
  
     0.741
EKE99322.1
Hypothetical protein; KEGG: bfo:BRAFLDRAFT_102880 6.8e-10 hypothetical protein; K11839 ubiquitin carboxyl-terminal hydrolase 8.
  
     0.732
EKE97150.1
AbrB family transcriptional regulator; KEGG: pfu:PF1565 0.71 rpoH; DNA-directed RNA polymerase subunit H K03053.
  
     0.728
EKF03825.1
Hypothetical protein; KEGG: cts:Ctha_0833 0.041 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.727
EKF04674.1
Hypothetical protein; KEGG: rsa:RSal33209_2270 0.25 pgk; phosphoglycerate kinase K00927; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.686
EKE99173.1
POTRA domain, FtsQ-type; KEGG: tte:TTE1196 0.92 dtd; D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase.
  
   
 0.685
EKF03826.1
Putative surface antigen; KEGG: cre:CHLREDRAFT_195498 1.1e-74 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 10.00.
  
   
 0.669
EKE99424.1
ABC superfamily ATP binding protein; KEGG: fph:Fphi_1240 0.13 arsenate reductase; K00537 arsenate reductase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.651
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.