STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05771.1Hypothetical protein; KEGG: mmw:Mmwyl1_1378 0.00023 cobalamin (vitamin B12) biosynthesis CbiX protein; K03795 sirohydrochlorin cobaltochelatase; Psort location: Cytoplasmic, score: 8.96. (132 aa)    
Predicted Functional Partners:
EKF06039.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; KEGG: ana:all2810 1.2e-187 glutathione dependent formaldehyde dehydrogenase; K00001 alcohol dehydrogenase K00121; Psort location: Cytoplasmic, score: 9.97; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.873
EKF04948.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.834
EKF05770.1
Hypothetical protein; KEGG: bfo:BRAFLDRAFT_124949 5.5e-10 hypothetical protein; K11449 jumonji domain-containing protein 1.
       0.773
EKE99180.1
KEGG: pmj:P9211_18311 7.8e-18 type II alternative sigma-70 family RNA polymerase sigma factor K03086; Psort location: Cytoplasmic, score: 9.97.
    
   0.611
EKF01326.1
KEGG: ate:Athe_2144 5.4e-18 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family.
    
   0.611
menH
Propable alpha/beta hydrolase fold protein; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC); Belongs to the AB hydrolase superfamily. MenH family.
       0.569
EKE97937.1
Cadmium-translocating P-type ATPase; KEGG: ana:alr7622 0. cation-transporting ATPase; K01532 Cd2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.569
EKE98042.1
Cadmium-translocating P-type ATPase; KEGG: ana:alr7622 8.6e-249 cation-transporting ATPase; K01532 Cd2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.569
carA
KEGG: ana:alr1155 1.4e-184 carbamoyl phosphate synthase small subunit K01956; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarA family.
      
 0.536
EKF04833.1
Hypothetical protein; KEGG: cdi:DIP2249 0.48 putative nitric-oxide reductase; K04561 nitric-oxide reductase, cytochrome b-containing subunit I.
  
     0.488
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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