STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05776.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (193 aa)    
Predicted Functional Partners:
hisI
KEGG: npu:Npun_F4098 6.9e-105 phosphoribosyl-AMP cyclohydrolase K11755; Psort location: Cytoplasmic, score: 9.97; In the N-terminal section; belongs to the PRA-CH family.
       0.620
EKF05777.1
Hypothetical protein; KEGG: efa:EF1688 0.25 recJ; single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease.
       0.489
EKF05778.1
Cytotoxic translational protein; KEGG: rca:Rcas_2901 0.57 exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit.
       0.489
EKF05774.1
Putative cation transport regulator; KEGG: tps:THAPSDRAFT_40393 0.49 PYK1; pyruvate kinase K00873.
       0.430
EKF01466.1
Hypothetical protein; KEGG: mga:MGA_0605 0.64 holB; DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 8.96.
  
     0.401
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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