STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05778.1Cytotoxic translational protein; KEGG: rca:Rcas_2901 0.57 exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit. (128 aa)    
Predicted Functional Partners:
EKF05777.1
Hypothetical protein; KEGG: efa:EF1688 0.25 recJ; single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease.
     
 0.826
EKF04983.1
RE family protein; KEGG: acr:Acry_3583 0.083 DNA-cytosine methyltransferase K00558.
   
 0.743
EKF04465.1
RE family protein; KEGG: tsi:TSIB_0089 0.10 predicted ATP-dependent protease; K04076 Lon-like ATP-dependent protease.
   
 0.743
EKF02207.1
Helix-turn-helix protein; KEGG: scl:sce5298 0.42 holA; putative DNA polymerase III, delta subunit K02340.
   
 0.743
EKF02052.1
RE family transcriptional regulator; KEGG: rsh:Rsph17029_3387 0.00049 DNA-cytosine methyltransferase K00558.
   
 0.743
EKE99566.1
Hypothetical protein; KEGG: rpf:Rpic12D_2435 0.78 DNA-3-methyladenine glycosylase II K01247.
   
 0.743
EKE96732.1
Putative transcription regulator; KEGG: hwa:HQ1364A 0.36 uvrD; DNA helicase II K03657; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.685
EKE97101.1
Toxin-antitoxin system, toxin component, HicA family; KEGG: maq:Maqu_3558 0.20 acetylornithine deacetylase K01438.
  
  
 0.673
EKF03650.1
Addiction module toxin, Txe/YoeB family; KEGG: hch:HCH_06393 0.98 dGTP triphosphohydrolase; K01129 dGTPase; Psort location: Cytoplasmic, score: 8.96.
    
 0.660
EKF04596.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.659
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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