STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05803.1Hypothetical protein; KEGG: mvn:Mevan_0874 0.52 tetrahydromethanopterin S-methyltransferase subunit D K00580; Psort location: CytoplasmicMembrane, score: 10.00. (110 aa)    
Predicted Functional Partners:
EKF05804.1
Hypothetical protein; KEGG: sil:SPO3635 0.31 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
       0.787
EKF05805.1
Cytochrome c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.587
EKF05806.1
KEGG: ana:alr2732 4.7e-42 coxA; cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I; Psort location: CytoplasmicMembrane, score: 9.82.
     
 0.561
EKF05807.1
Resolvase; KEGG: paa:Paes_0921 0.40 DNA polymerase III, alpha subunit K02337; Psort location: Cytoplasmic, score: 8.96.
       0.454
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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