STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05834.1KEGG: npu:Npun_F3055 6.9e-295 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82. (641 aa)    
Predicted Functional Partners:
EKF02175.1
KEGG: npu:Npun_F4453 2.0e-281 penicillin-binding protein, transpeptidase K05515; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.961
EKF05835.1
KEGG: npu:Npun_F0168 1.2e-212 penicillin-binding protein, transpeptidase K03587; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.946
EKF05678.1
KEGG: npu:Npun_F0168 8.3e-251 penicillin-binding protein, transpeptidase K03587; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
0.908
EKF02174.1
Cell division protein; KEGG: npu:Npun_F4452 7.0e-286 penicillin-binding protein, transpeptidase K05515; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
0.908
EKF05645.1
Hypothetical protein; KEGG: cyt:cce_4485 1.8e-06 atpG; ATP synthase F0, B' subunit; K02109 F-type H+-transporting ATPase subunit b; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.892
EKE98586.1
Bacterial pre-peptidase protein; KEGG: kse:Ksed_00180 3.5e-12 protein kinase family protein with PASTA domain; K08884 serine/threonine protein kinase, bacterial.
    
 
 0.818
EKF02756.1
KEGG: cya:CYA_2262 9.9e-23 protein kinase; K00870 protein kinase.
    
 
 0.818
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.759
EKF02019.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: hip:CGSHiEE_06365 9.9e-42 murG; N-acetylglucosaminyl transferase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
  
 
 
 0.745
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 
 0.740
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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