STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05849.1Hypothetical protein; KEGG: sml:Smlt0161 0.64 sodC2; putative superoxide dismutase; K04565 Cu/Zn superoxide dismutase. (208 aa)    
Predicted Functional Partners:
ndhH
NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
   0.669
EKF05883.1
CO2 hydration protein; KEGG: ppp:PHYPADRAFT_111923 0.54 hypothetical protein; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 8.96.
    
   0.624
EKF00360.1
CO2 hydration protein; KEGG: mcc:700251 0.32 PSMA3; proteasome (prosome, macropain) subunit, alpha type, 3; K02727 20S proteasome subunit alpha 7.
    
   0.624
EKF05850.1
Response regulator; KEGG: npu:Npun_F4214 3.0e-40 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
       0.482
EKE96802.1
Glycosyl hydrolase, family 18; KEGG: edi:EDI_120190 1.4e-11 chitotriosidase-1 precursor; Psort location: CytoplasmicMembrane, score: 9.82.
     
  0.466
EKF05848.1
Sensor histidine kinase; KEGG: ava:Ava_2771 1.2e-90 multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
       0.431
EKF03810.1
Hypothetical protein; KEGG: tel:tsr0706 1.1e-10 ndhL; NADH dehydrogenase subunit; K05583 NADH dehydrogenase I subunit L.
    
   0.414
EKF03486.1
Hypothetical protein; KEGG: abc:ACICU_03555 0.34 ureidoglycolate hydrolase; K01483 ureidoglycolate hydrolase.
    
   0.414
ndhC
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
   0.414
ndhK
NADH dehydrogenase subunit B; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.
    
   0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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