STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (349 aa)    
Predicted Functional Partners:
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
    
 0.916
EKE97602.1
Putative geranyltranstransferase; KEGG: ava:Ava_2704 1.2e-141 farnesyl-diphosphate synthase K00795; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
 
 0.909
EKF04591.1
Hypothetical protein; KEGG: hla:Hlac_2263 0.00031 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.817
EKF04592.1
Small GTP-binding protein; KEGG: blo:BL0738 1.4e-05 bifunctional cytidylate kinase/GTP-binding protein K03977.
       0.773
EKF03662.1
Aminotransferase; KEGG: noc:Noc_1315 6.9e-89 aminotransferase, class V K03430; Psort location: Cytoplasmic, score: 9.97.
   
 0.608
EKF02040.1
Aminotransferase, class V; KEGG: npu:Npun_F4445 9.6e-186 aminotransferase, class V; Psort location: Cytoplasmic, score: 9.97.
   
 0.608
EKF04593.1
Hypothetical protein; KEGG: swp:swp_2417 0.9997 sulfatase family protein.
       0.601
EKF04595.1
Maleylacetoacetate isomerase; MAAI (glutathione S-transferase zeta 1, GSTZ1-1); K00799 glutathione S-transferase; KEGG: bra:BRADO0684 0.70 maiA;K01800.
       0.601
ffh
Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
  
 0.504
EKF02499.1
Hypothetical protein; KEGG: fba:FIC_02097 4.9e-07 catalase.
   
 
 0.491
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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