STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04604.1DMT superfamily drug/metabolite transporter; KEGG: azo:azo1408 0.080 nuoM; NADH dehydrogenase subunit M K00342. (305 aa)    
Predicted Functional Partners:
EKE98839.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
  0.583
EKE97496.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
  0.583
EKF04602.1
Hypothetical protein; KEGG: swd:Swoo_3218 0.93 peptidase U32; K08303 putative protease.
       0.554
EKF04603.1
Hypothetical protein; KEGG: hiq:CGSHiGG_01735 0.81 hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.554
EKE97963.1
Hypothetical protein; KEGG: nca:Noca_3746 1.7e-17 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase.
    
  0.521
EKF00862.1
Hypothetical protein; KEGG: stp:Strop_2930 2.1e-36 sulfatase; K01130 arylsulfatase.
    
  0.521
EKF06208.1
KEGG: npu:Npun_F6325 6.2e-223 polar amino acid ABC transporter, inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.513
EKF00929.1
Putative nucleotidyltransferase; KEGG: dze:Dd1591_3083 0.24 exodeoxyribonuclease VII, small subunit; K03602 exodeoxyribonuclease VII small subunit; Psort location: Cytoplasmic, score: 8.96.
  
     0.513
EKF00051.1
ABC transporter, permease protein; KEGG: npu:Npun_R0695 1.5e-70 extracellular solute-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.513
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
  0.506
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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