Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKF04668.1KEGG: pjd:Pjdr2_5363 7.5e-13 transcriptional regulator, AraC family. (300 aa)    
Predicted Functional Partners:
EKE96388.1
KEGG: npu:Npun_F4909 1.1e-35 two component AraC family transcriptional regulator.
  
     0.765
EKE96810.1
KEGG: npu:Npun_R3197 2.0e-36 two component AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
     0.757
EKE99936.1
KEGG: bur:Bcep18194_C7173 3.9e-07 two component AraC family transcriptional regulator K05971; Psort location: Cytoplasmic, score: 9.97.
  
     0.757
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.630
EKF04669.1
Putative glutathione S-transferase; KEGG: bha:BH2386 0.93 pgsA; phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
       0.528
EKF06242.1
KEGG: shn:Shewana3_3435 1.9e-29 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; Belongs to the LysR transcriptional regulatory family.
  
    0.473
EKF05757.1
KEGG: shn:Shewana3_3435 1.7e-30 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
    0.467
EKF04671.1
Hypothetical protein; KEGG: bbt:BBta_3170 1.9e-13 putative short-chain dehydrogenase/reductase K00044.
       0.459
EKF04536.1
KEGG: pjd:Pjdr2_5363 1.3e-14 transcriptional regulator, AraC family.
 
 
0.409
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
     
 0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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