STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04747.1KEGG: ava:Ava_3351 3.6e-154 glycosyl transferase family protein K00721. (435 aa)    
Predicted Functional Partners:
EKF04745.1
NAD-binding domain 4; KEGG: cyn:Cyan7425_0420 4.7e-154 NAD-dependent epimerase/dehydratase; K12454 CDP-paratose 2-epimerase.
 
  
 0.940
EKF04749.1
KEGG: ava:Ava_3353 5.6e-126 NAD-dependent epimerase/dehydratase K01784.
 
    0.879
EKF04746.1
Hypothetical protein; KEGG: pmu:PM0973 0.12 cydB; CydB; K00426 cytochrome bd-I oxidase subunit II.
       0.773
EKF05086.1
Hypothetical protein; KEGG: saf:SULAZ_1665 1.5e-07 dolichyl-phosphate-mannose-protein mannosyltransferase.
   
  0.592
EKF05088.1
Hypothetical protein; KEGG: car:cauri_0183 6.5e-07 GPI mannosyltransferase 2.
   
  0.592
EKF02966.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; KEGG: npu:Npun_F0019 1.4e-202 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.549
EKF01797.1
Hypothetical protein; KEGG: mar:MAE_39090 0.0019 penicillin-binding protein; K05366 penicillin-binding protein 1A.
   
 0.549
EKF00529.1
Hypothetical protein; KEGG: ava:Ava_3542 0.0068 PAS/PAC sensor signal transduction histidine kinase K00936.
   
 0.549
thrS
threonine--tRNA ligase; KEGG: ana:alr0335 0. thrS; threonyl-tRNA synthetase K01868; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.524
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
     
 0.460
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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