STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04781.1Hypothetical protein; KEGG: rer:RER_23720 0.41 methyltransferase. (216 aa)    
Predicted Functional Partners:
EKF04782.1
ABC transporter, ATP-binding protein; KEGG: lbi:LEPBI_I2017 5.1e-77 ABC-type transport system, ATP binding protein K09691.
 
    0.843
EKF04776.1
KEGG: gfo:GFO_2031 4.6e-28 glycosyl transferase family protein.
      0.584
EKF04783.1
KEGG: ecx:EcHS_A2171 2.3e-26 ABC-2 type transporter K09690.
 
    0.575
EKF02966.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; KEGG: npu:Npun_F0019 1.4e-202 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.571
EKF01515.1
Putative outer membrane protein; KEGG: chu:CHU_1027 1.1e-09 hypothetical protein K01238.
  
     0.549
EKF00852.1
Carbohydrate-selective porin OprB; KEGG: shw:Sputw3181_3904 0.43 multi-sensor hybrid histidine kinase; K07679 two-component system, NarL family, sensor histidine kinase EvgS; Psort location: OuterMembrane, score: 9.49; Belongs to the OprB family.
  
     0.546
EKF05086.1
Hypothetical protein; KEGG: saf:SULAZ_1665 1.5e-07 dolichyl-phosphate-mannose-protein mannosyltransferase.
    
  0.532
EKF05088.1
Hypothetical protein; KEGG: car:cauri_0183 6.5e-07 GPI mannosyltransferase 2.
    
  0.532
EKF04779.1
Putative SAM-dependent methyltransferase; KEGG: lbi:LEPBI_I0584 0.00011 putative S-adenosyl-L-methionine-dependent methyltransferase.
       0.531
gmd
Putative GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
    0.526
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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