STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF04809.1BNR/Asp-box repeat protein; KEGG: cja:CJA_2477 1.5e-84 gly74A; endo-1,4-beta-glucanase/xyloglucanase, putative, gly74A. (707 aa)    
Predicted Functional Partners:
EKF03586.1
Glycosyl hydrolase family 10; KEGG: cyn:Cyan7425_1132 5.5e-96 endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.647
psbA
Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
    
   0.594
psbA-2
Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
    
   0.594
EKF04160.1
Photosystem II Q(b) protein; KEGG: bfr:BF0289 0.79 hppA; membrane-bound proton-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the reaction center PufL/M/PsbA/D family.
    
   0.594
EKE98502.1
Hypothetical protein; KEGG: tcx:Tcr_1347 0.059 glutamate--ammonia ligase K01915; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.594
EKE96608.1
Hypothetical protein; KEGG: ote:Oter_4077 0.17 cytochrome c oxidase, cbb3-type, subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.594
EKE96609.1
Photosystem II Q(b) protein; KEGG: pmo:Pmob_0065 0.65 RnfA-Nqr electron transport subunit; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.594
psbA-3
Photosystem Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
    
   0.594
EKE96440.1
KEGG: pmo:Pmob_0065 0.41 RnfA-Nqr electron transport subunit; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the reaction center PufL/M/PsbA/D family.
    
   0.594
psbA-4
Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
    
   0.594
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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