STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04811.1Response regulator; KEGG: npu:Npun_F0484 1.6e-43 two component LuxR family transcriptional regulator. (236 aa)    
Predicted Functional Partners:
EKF02767.1
Sensor histidine kinase; KEGG: rxy:Rxyl_2612 1.1e-28 GAF sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.855
EKE99730.1
Sensor histidine kinase; KEGG: rxy:Rxyl_2612 4.6e-28 GAF sensor signal transduction histidine kinase.
  
   0.844
EKE98676.1
KEGG: sde:Sde_3821 4.6e-27 sensor histidine kinase, putative; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 7.88.
  
   0.843
EKE98428.1
Sensor histidine kinase; KEGG: ava:Ava_1564 3.7e-276 multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.761
EKE96880.1
PAS domain S-box; KEGG: syn:slr1759 2.1e-245 hybrid sensory kinase; K02489 two-component system, PleD related family, sensor kinase and response regulator; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.761
EKE99368.1
Sensor histidine kinase; KEGG: ava:Ava_1564 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.761
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
 
 0.726
EKF01994.1
LuxR family protein; KEGG: fal:FRAAL1304 1.1e-08 putative protein-glutamate methylesterase.
  
     0.715
EKE98614.1
Hypothetical protein; KEGG: npu:Npun_F1211 1.2e-27 integral membrane sensor hybrid histidine kinase.
   
 
 0.712
EKF00301.1
HAMP domain protein; KEGG: ava:Ava_4696 0. GAF sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.712
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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