STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04834.1Putative carbohydrate-selective porin OprB; KEGG: mta:Moth_1272 0.89 N-acetylmuramoyl-L-alanine amidase K01448; Belongs to the OprB family. (547 aa)    
Predicted Functional Partners:
EKE99321.1
Putative RNase H family protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.671
EKF01433.1
Putative MOP family protein; KEGG: cms:CMS_1232 0.991 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620.
  
  
 0.658
EKF06240.1
Sensor histidine kinase; KEGG: ava:Ava_0521 0. multi-sensor signal transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.602
EKE99322.1
Hypothetical protein; KEGG: bfo:BRAFLDRAFT_102880 6.8e-10 hypothetical protein; K11839 ubiquitin carboxyl-terminal hydrolase 8.
  
     0.599
EKE99330.1
Putative polysaccharide biosynthesis protein; KEGG: ddr:Deide_20770 0.34 putative fructose IIC component, phosphotransferase system; putative membrane protein; K02769 PTS system, fructose-specific IIB component K02770; Psort location: Periplasmic, score: 9.76.
     
 0.588
EKE97133.1
Putative Tfp pilus assembly protein; KEGG: yli:YALI0F09273g 0.64 YALI0F09273p; K00863 dihydroxyacetone kinase.
  
     0.582
EKF02815.1
KEGG: ava:Ava_3135 4.5e-124 hypothetical protein.
  
     0.573
EKE99742.1
YjgP/YjgQ family protein; KEGG: hiq:CGSHiGG_02270 2.0e-06 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091.
  
     0.539
EKE97183.1
Cytochrome c; KEGG: hmo:HM1_0696 1.2e-05 petA; cytochrome c, diheme subunit of cytochrome bc complex PetA; K00406 cb-type cytochrome c oxidase subunit III.
  
     0.531
EKF01418.1
Hypothetical protein; KEGG: lga:LGAS_1204 7.1e-05 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563.
  
     0.526
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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