STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF04879.1Methyltransferase domain protein; KEGG: ccs:CCNA_02985 1.3e-05 methyltransferase. (245 aa)    
Predicted Functional Partners:
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.829
EKF04816.1
Putative domain HDIG; KEGG: sun:SUN_0962 6.8e-07 cca; polynucleotide adenylyltransferase/metal-dependent phosphohydrolase K00974.
   
   0.758
EKE99247.1
Hypothetical protein; KEGG: rer:RER_24970 7.8e-12 polynucleotide kinase.
   
   0.758
EKF00303.1
Hypothetical protein; KEGG: mar:MAE_59890 0.0014 gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A.
  
 0.720
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.682
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
   
 0.638
EKF04880.1
KEGG: syg:sync_0223 6.2e-33 glycosyl transferase, group 1 K01043.
 
     0.621
EKF04878.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 5.5e-12 cytosol aminopeptidase.
       0.588
EKF04752.1
Hypothetical protein; KEGG: ava:Ava_3472 2.2e-09 ubiA; tocopherol phytyltransferase K09833.
   
 0.587
EKE96607.1
AMP-binding enzyme; KEGG: ava:Ava_C0002 1.2e-217 amino acid adenylation K05914; Psort location: Cytoplasmic, score: 9.97.
   
 0.564
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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