STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF04898.1Hypothetical protein; KEGG: syr:SynRCC307_1597 0.0075 lipase family protein; K01046 triacylglycerol lipase. (446 aa)    
Predicted Functional Partners:
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
    
 0.792
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
    
  0.754
EKE96607.1
AMP-binding enzyme; KEGG: ava:Ava_C0002 1.2e-217 amino acid adenylation K05914; Psort location: Cytoplasmic, score: 9.97.
    
 0.753
EKF04551.1
AMP-binding enzyme; KEGG: ava:Ava_C0005 0. AMP-dependent synthetase and ligase K01779; Psort location: Cytoplasmic, score: 9.97; Belongs to the ATP-dependent AMP-binding enzyme family.
    
  0.694
EKE97671.1
AMP-binding enzyme; KEGG: bbt:BBta_4110 1.4e-115 putative non-ribosomal peptide synthase; Psort location: Cytoplasmic, score: 9.26.
    
  0.694
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.688
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.688
rpmA
Ribosomal protein L27; KEGG: rca:Rcas_4308 0.62 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; K00860 adenylylsulfate kinase K00958; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.688
rpmB
Ribosomal protein L28; KEGG: bce:BC3926 0.95 ATP-dependent protease La K07177; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.688
EKF02495.1
KEGG: ana:alr3901 1.6e-64 methionine sulfoxide reductase B K07305.
    
   0.688
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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