STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04936.1Hypothetical protein; KEGG: ava:Ava_4160 6.9e-18 VCBS K01317. (875 aa)    
Predicted Functional Partners:
EKF04937.1
KEGG: ani:AN2873.2 0.43 hypothetical protein; K11874 ubiquitin carboxyl-terminal hydrolase 16.
       0.535
EKF01110.1
Bacterial signaling repeat protein; KEGG: bpl:BURPS1106A_0755 9.2e-18 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.528
EKF00725.1
Hypothetical protein; KEGG: rru:Rru_A0061 2.7e-05 purine phosphorylases family protein 1 K01243.
   
    0.516
EKF06231.1
Family 2 glycosyltransferase; KEGG: cbi:CLJ_B2953 2.6e-26 glycosyl transferase, group 2 family protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.468
EKE96701.1
Kinase domain protein; KEGG: ava:Ava_A0032 2.1e-284 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.468
EKF02752.1
KEGG: cyb:CYB_1515 4.3e-35 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.64.
  
 
 0.454
EKF04752.1
Hypothetical protein; KEGG: ava:Ava_3472 2.2e-09 ubiA; tocopherol phytyltransferase K09833.
  
 
 0.428
EKF04530.1
FG-GAP repeat protein; KEGG: rba:RB105 0.00031 cysteine proteinase K01376.
  
 
 0.418
EKF01984.1
KEGG: cyb:CYB_1515 5.6e-38 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.418
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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