STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF04947.1Putative endonuclease; KEGG: ctc:CTC01256 7.8e-10 hypothetical protein K07460; Belongs to the UPF0102 family. (160 aa)    
Predicted Functional Partners:
EKE98740.1
Mg chelatase-like protein; KEGG: chu:CHU_0354 8.7e-137 ch1I; magnesium chelatase, subunit ChlI K07391; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.713
EKF00577.1
Putative aminodophosphoribosyltransferase purF protein; KEGG: chu:CHU_3495 5.3e-11 purF; amidophosphoribosyltransferase K00764.
 
    0.685
EKF05932.1
DNA processing protein, Smf family; KEGG: hip:CGSHiEE_07040 2.4e-40 2-isopropylmalate synthase K04096; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.654
EKF04946.1
Putative pentapeptide-repeat protein; KEGG: ana:alr3268 4.6e-09 serine/threonine kinase; K08884 serine/threonine protein kinase, bacterial.
       0.639
EKE99716.1
Signal transduction diguanylate cyclase; KEGG: npu:Npun_F5361 1.3e-108 response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
   
    0.606
EKF00986.1
Anti-sigma regulatory factor; KEGG: scl:sce3610 6.7e-20 rsbX1; phosphoserine phosphatase.
   
    0.539
EKE97040.1
Putative DNA internalization competence protein ComEC/Rec2; KEGG: stp:Strop_2269 0.027 apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.454
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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