Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF04958.1Hypothetical protein; KEGG: ana:alr1254 0.88 DNA polymerase I; K02335 DNA polymerase I. (244 aa)    
Predicted Functional Partners:
EKF04959.1
KEGG: xfa:XF1804 3.0e-56 site-specific DNA-methyltransferase; K06223 DNA adenine methylase.
       0.773
EKF04960.1
Hypothetical protein; KEGG: cco:CCC13826_1522 0.016 putative methionyl-tRNA formyltransferase.
       0.548
EKF04961.1
Hypothetical protein; KEGG: bpd:BURPS668_A2296 7.7e-06 diaminobutyrate--2-oxoglutarate aminotransferase; K00836 diaminobutyrate-2-oxoglutarate transaminase.
       0.463
EKF04962.1
KEGG: shn:Shewana3_3368 7.1e-09 MarR family transcriptional regulator; K03828 putative acetyltransferase.
       0.463
EKF04963.1
ABC-2 type transporter; KEGG: dme:Dmel_CG33970 5.2e-05 CG33970 gene product from transcript CG33970-RA K01509.
       0.452
EKF04964.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_F4671 1.8e-106 ABC transporter related K09687.
       0.452
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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