STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05016.1KEGG: ana:alr0093 6.3e-237 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase. (641 aa)    
Predicted Functional Partners:
EKE96421.1
Hypothetical protein; KEGG: ppd:Ppro_2406 0.081 xseA; exodeoxyribonuclease VII large subunit K03601; Psort location: Cytoplasmic, score: 8.96.
   
   0.679
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.650
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.644
EKF02586.1
KEGG: cya:CYA_1911 2.0e-43 S54 family peptidase K01362.
   
   0.594
EKF01429.1
KEGG: cya:CYA_1911 3.4e-87 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.594
EKF01430.1
KEGG: cya:CYA_1911 1.2e-66 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.594
EKF03872.1
Competence/damage-inducible protein CinA protein; KEGG: cco:CCC13826_0279 1.9e-14 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
 
     0.577
EKF04101.1
Peptidase, M23 family; KEGG: npu:Npun_F6078 6.8e-224 peptidase M23B; Psort location: OuterMembrane, score: 8.86.
 
   
 0.555
EKF05017.1
Hypothetical protein; KEGG: pvx:PVX_082515 0.99 tyrosine phosphatase; K10703 3-hydroxy acyl-CoA dehydratase.
       0.547
EKF05014.1
Hypothetical protein.
       0.494
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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