Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF05021.1 | EKF05022.1 | FDUTEX481_01187 | FDUTEX481_01188 | 3-phosphoshikimate 1-carboxyvinyltransferase family protein; KEGG: dvl:Dvul_2635 0.52 N-acylneuraminate-9-phosphate synthase K01654. | Hypothetical protein; KEGG: ssa:SSA_0428 0.87 hutG; formimidoylglutamase K01479. | 0.773 |
EKF05021.1 | EKF05023.1 | FDUTEX481_01187 | FDUTEX481_01189 | 3-phosphoshikimate 1-carboxyvinyltransferase family protein; KEGG: dvl:Dvul_2635 0.52 N-acylneuraminate-9-phosphate synthase K01654. | Outer membrane protein; KEGG: pna:Pnap_3088 0.082 protein of unknown function DUF513, HemX; K02496 uroporphyrin-III C-methyltransferase. | 0.467 |
EKF05022.1 | EKF05021.1 | FDUTEX481_01188 | FDUTEX481_01187 | Hypothetical protein; KEGG: ssa:SSA_0428 0.87 hutG; formimidoylglutamase K01479. | 3-phosphoshikimate 1-carboxyvinyltransferase family protein; KEGG: dvl:Dvul_2635 0.52 N-acylneuraminate-9-phosphate synthase K01654. | 0.773 |
EKF05022.1 | EKF05023.1 | FDUTEX481_01188 | FDUTEX481_01189 | Hypothetical protein; KEGG: ssa:SSA_0428 0.87 hutG; formimidoylglutamase K01479. | Outer membrane protein; KEGG: pna:Pnap_3088 0.082 protein of unknown function DUF513, HemX; K02496 uroporphyrin-III C-methyltransferase. | 0.467 |
EKF05023.1 | EKF05021.1 | FDUTEX481_01189 | FDUTEX481_01187 | Outer membrane protein; KEGG: pna:Pnap_3088 0.082 protein of unknown function DUF513, HemX; K02496 uroporphyrin-III C-methyltransferase. | 3-phosphoshikimate 1-carboxyvinyltransferase family protein; KEGG: dvl:Dvul_2635 0.52 N-acylneuraminate-9-phosphate synthase K01654. | 0.467 |
EKF05023.1 | EKF05022.1 | FDUTEX481_01189 | FDUTEX481_01188 | Outer membrane protein; KEGG: pna:Pnap_3088 0.082 protein of unknown function DUF513, HemX; K02496 uroporphyrin-III C-methyltransferase. | Hypothetical protein; KEGG: ssa:SSA_0428 0.87 hutG; formimidoylglutamase K01479. | 0.467 |