STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05048.1Queuine tRNA-ribosyltransferase; KEGG: syn:slr0713 0.79 tgt;K00773. (56 aa)    
Predicted Functional Partners:
EKF05047.1
Putative radical SAM protein; KEGG: sto:ST0056 7.6e-16 magnesium-protoporphyrin IX monomethyl ester oxidative cyclase 66 kd subunit; K04034 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase.
       0.701
EKF05049.1
Putative sensor protein; KEGG: syf:Synpcc7942_2282 4.9e-27 GAF sensor signal transduction histidine kinase K00936.
       0.486
EKF05050.1
Pentapeptide-repeat protein; KEGG: cyn:Cyan7425_4550 9.3e-16 serine/threonine protein kinase with pentapeptide repeats; K08884 serine/threonine protein kinase, bacterial.
       0.486
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.