STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF05084.1KEGG: cya:CYA_0756 2.6e-31 dolichyl-phosphate-mannose-protein mannosyltransferase K00728. (509 aa)    
Predicted Functional Partners:
EKF05083.1
4-amino-4-deoxy-L-arabinose; KEGG: rba:RB13211 5.2e-05 dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis K00721.
 
     0.824
EKE99084.1
Glycosyltransferase, group 2 family protein; KEGG: ana:alr3380 1.8e-145 dolichol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.704
EKF01238.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.567
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
   
 0.541
EKE99228.1
Hypothetical protein; KEGG: pca:Pcar_0079 0.9996 putative 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase.
  
    0.529
EKF03919.1
Hypothetical protein; KEGG: rhi:NGR_c09290 0.010 lysyl-tRNA synthetase 2 K07027; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.516
EKF05082.1
Hypothetical protein; KEGG: wpi:WPa_0683 0.82 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase.
       0.514
EKF05695.1
Glycosyl transferase; KEGG: ana:all5118 5.3e-146 hypothetical protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.490
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
  
   
 0.471
lpxA
acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.460
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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