STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKF05113.1Putative PBS lyase HEAT protein; KEGG: nph:NP2168A 6.7e-06 che operon protein (homolog 1 to phycocyanobilin lyase subunit). (1120 aa)    
Predicted Functional Partners:
EKF01663.1
Dynamin family protein; KEGG: hch:HCH_07075 0.00060 atpH; F0F1 ATP synthase subunit delta K02113; Psort location: OuterMembrane, score: 9.49.
  
 
   0.689
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
  0.683
EKF00793.1
KEGG: hau:Haur_4088 8.2e-70 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase.
   
   0.665
EKF01664.1
Dynamin family protein; KEGG: afm:AFUA_5G13392 1.9e-10 transmembrane GTPase Fzo1 K06030; Psort location: Cytoplasmic, score: 8.96.
  
     0.618
EKE96480.1
Hypothetical protein; KEGG: ava:Ava_2109 0.012 serine/threonine protein kinase with CHASE2 sensor K00908.
  
     0.590
EKE96642.1
Putative CHASE2 domain protein; KEGG: sal:Sala_0353 0.0092 adenylate/guanylate cyclase; K01768 adenylate cyclase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.577
EKF05112.1
Hypothetical protein; KEGG: jan:Jann_3212 0.0054 adenine phosphoribosyltransferase K00759.
       0.566
EKF02918.1
Putative N-acetylglutamate synthase; KEGG: mma:MM_2474 5.6e-07 ribosomal-protein-alanine acetyltransferase K00676.
  
     0.556
EKE97305.1
KEGG: sha:SH2234 0.999 hypothetical protein; K02484 two-component system, OmpR family, sensor kinase.
  
     0.540
EKF02407.1
Hypothetical protein; KEGG: yli:YALI0B04180g 0.57 YALI0B04180p; K01872 alanyl-tRNA synthetase.
  
     0.534
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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