STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05148.1TrkA-C domain protein; KEGG: psa:PST_1915 0.0084 3-hydroxyacyl-CoA dehydrogenase FadB2x; K00022 3-hydroxyacyl-CoA dehydrogenase. (225 aa)    
Predicted Functional Partners:
EKF04932.1
KEGG: cyn:Cyan7425_5257 2.5e-164 potassium uptake protein, TrkH family K03498.
  
 
 0.738
EKF00369.1
rRNA SAM-dependent protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.698
EKF05150.1
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
   
 0.696
EKF05149.1
Hypothetical protein; KEGG: nvi:100116983 0.79 similar to adenylate kinase isoenzyme; K00939 adenylate kinase.
 
     0.649
EKE96938.1
Molybdopterin converting factor, subunit 2; KEGG: ajs:Ajs_0142 0.85 intradiol ring-cleavage dioxygenase; K03381 catechol 1,2-dioxygenase.
   
    0.644
coaX
Transcriptional regulator; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.490
EKE99008.1
KEGG: cpr:CPR_1400 2.4e-47 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.476
EKE98423.1
Putative ATP synthase F0, A subunit; KEGG: vfi:VF_1798 2.6e-49 clcA; chloride channel protein K03281; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.465
EKE99262.1
TrkA-C domain protein; KEGG: mpa:MAP3299c 2.2e-05 hypothetical protein; K03426 NAD+ diphosphatase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.450
EKF04926.1
KEGG: npu:Npun_R1866 2.5e-219 uroporphyrin-III C-methyltransferase; K01719 uroporphyrinogen-III synthase K02303; Belongs to the precorrin methyltransferase family.
  
    0.445
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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