EKF05162.1 protein (Tolypothrix sp. PCC7601)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EKF05162.1

Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115. (163 aa)

Predicted Functional Partners:

EKF05161.1

0.587

EKF05160.1

0.547

ispF

0.543

trmD

0.429

Your Current Organism:

Tolypothrix sp. PCC7601

NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKF05160.1	EKF05161.1	FDUTEX481_01330	FDUTEX481_01331	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	0.757
EKF05160.1	EKF05162.1	FDUTEX481_01330	FDUTEX481_01332	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	0.547
EKF05160.1	ispF	FDUTEX481_01330	FDUTEX481_01333	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	0.445
EKF05161.1	EKF05160.1	FDUTEX481_01331	FDUTEX481_01330	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	0.757
EKF05161.1	EKF05162.1	FDUTEX481_01331	FDUTEX481_01332	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	0.587
EKF05161.1	ispF	FDUTEX481_01331	FDUTEX481_01333	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	0.411
EKF05162.1	EKF05160.1	FDUTEX481_01332	FDUTEX481_01330	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	0.547
EKF05162.1	EKF05161.1	FDUTEX481_01332	FDUTEX481_01331	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	0.587
EKF05162.1	ispF	FDUTEX481_01332	FDUTEX481_01333	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	0.543
EKF05162.1	trmD	FDUTEX481_01332	FDUTEX481_01334	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	tRNA synthase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.429
ispF	EKF05160.1	FDUTEX481_01333	FDUTEX481_01330	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	Bacterial extracellular solute-binding protein, family 5; KEGG: glo:Glov_2097 3.7e-42 4-phytase K02035.	0.445
ispF	EKF05161.1	FDUTEX481_01333	FDUTEX481_01331	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	Hypothetical protein; KEGG: cbt:CLH_2169 0.15 xseA; exodeoxyribonuclease VII, large subunit K03601.	0.411
ispF	EKF05162.1	FDUTEX481_01333	FDUTEX481_01332	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	0.543
ispF	trmD	FDUTEX481_01333	FDUTEX481_01334	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	tRNA synthase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.970
trmD	EKF05162.1	FDUTEX481_01334	FDUTEX481_01332	tRNA synthase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	Hypothetical protein; KEGG: mpu:MYPU_2670 0.95 atpG; F0F1 ATP synthase subunit gamma K02115.	0.429
trmD	ispF	FDUTEX481_01334	FDUTEX481_01333	tRNA synthase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	2-C-methyl-D-erythritol; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).	0.970

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About