STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05181.1Urea ABC transporter, permease protein UrtB; KEGG: rha:RHA1_ro10323 7.3e-11 ABC branched chain amino acid transporter ATP-binding subunit K01552; Belongs to the binding-protein-dependent transport system permease family. (386 aa)    
Predicted Functional Partners:
EKF05182.1
Urea ABC transporter, permease protein UrtC; KEGG: har:HEAR2680 1.1e-25 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EKF05180.1
Urea ABC transporter, periplasmic urea-binding protein; KEGG: sto:ST1388 0.30 acyl-CoA synthase; K01897 long-chain acyl-CoA synthetase.
 
 0.997
EKF05183.1
Urea ABC transporter, ATP-binding protein UrtD; KEGG: ava:Ava_4364 2.4e-118 ABC transporter-like K11962.
 
 0.992
EKF05185.1
Urea ABC transporter, ATP-binding protein UrtE; KEGG: ava:Ava_4365 1.1e-111 ABC transporter-like K11963.
 
 
 0.988
EKF05700.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_0470 1.1e-113 ABC transporter-like K01995; Psort location: CytoplasmicMembrane, score: 9.98.
 
 
 0.954
EKF05699.1
KEGG: har:HEAR2680 7.4e-30 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.952
EKE98489.1
KEGG: har:HEAR2680 9.9e-12 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.951
EKE98488.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R3921 3.8e-127 ABC transporter related K11957; Psort location: Cytoplasmic, score: 9.12.
 
 0.946
EKF05701.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_0473 1.1e-104 ABC transporter-like K01996; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.887
EKF04706.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_F1167 1.1e-113 ABC transporter related K11958; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.882
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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